Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2413518 - 2413605 | Not Available |
| pyruvate kinase | SAMN04488524_2011 | Not Available | Negative | 2413653 - 2415083 | 52639.2 |
| hypothetical protein | SAMN04488524_2012 | Not Available | Negative | 2415227 - 2415646 | 16288.7 |
| acyl carrier protein | SAMN04488524_2013 | Not Available | Positive | 2415805 - 2416041 | 8487.95 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN04488524_2014 | Not Available | Positive | 2416071 - 2417324 | 44464.7 |
| ribonuclease-3 | SAMN04488524_2015 | Not Available | Positive | 2417379 - 2418107 | 27828.8 |
| hypothetical protein | SAMN04488524_2016 | Not Available | Negative | 2418112 - 2418822 | 27400.9 |
| tigr00255 family protein | SAMN04488524_2017 | Not Available | Positive | 2418935 - 2419798 | 32776.4 |
| guanylate kinase | SAMN04488524_2018 | Not Available | Positive | 2419806 - 2420375 | 21707.0 |
| nicotinate-nucleotide adenylyltransferase | SAMN04488524_2019 | Not Available | Positive | 2420372 - 2420944 | 21600.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

