Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0168 | Not Available | Negative | 247376 - 247540 | 6186.44 |
| vitamin k-dependent gamma-carboxylase | SAMN04488524_0169 | Not Available | Negative | 247627 - 248556 | 34795.7 |
| hypothetical protein | SAMN04488524_0170 | Not Available | Negative | 248576 - 249046 | 17564.0 |
| hypothetical protein | SAMN04488524_0171 | Not Available | Negative | 249119 - 249547 | 15046.5 |
| chat domain-containing protein | SAMN04488524_0172 | Not Available | Negative | 249654 - 252440 | 103838.0 |
| subtilase family protein | SAMN04488524_0173 | Not Available | Negative | 252445 - 253830 | 50602.3 |
| hypothetical protein | SAMN04488524_0174 | Not Available | Negative | 253858 - 254589 | 27363.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0175 | Not Available | Negative | 254592 - 255173 | 21710.3 |
| starch-binding associating with outer membrane | SAMN04488524_0176 | Not Available | Negative | 255296 - 257350 | 75369.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0177 | Not Available | Negative | 257365 - 260685 | 122712.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

