Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1_nc_021795: phage major capsid protein | SAMN04488524_0569 | Not Available | Negative | 734961 - 736172 | 44126.2 |
| Prohead protein | SAMN04488524_0570 | Not Available | Negative | 736180 - 737073 | 33489.8 |
| Glycosyltransferase | SAMN04488524_0571 | Not Available | Positive | 737157 - 738509 | 51990.1 |
| Hypothetical protein | SAMN04488524_0572 | Not Available | Positive | 738509 - 739063 | 21175.4 |
| hypothetical protein | SAMN04488524_0573 | Not Available | Negative | 739056 - 739442 | 14301.4 |
| 1_nc_021802: phage minor capsid protein | SAMN04488524_0574 | Not Available | Negative | 739459 - 740268 | 31064.1 |
| 1_nc_021802: phage portal protein | SAMN04488524_0575 | Not Available | Negative | 740268 - 741677 | 52649.6 |
| Terminase large subunit | SAMN04488524_0576 | Not Available | Negative | 741724 - 743037 | 49879.7 |
| Terminase | SAMN04488524_0577 | Not Available | Negative | 743003 - 743515 | 19357.9 |
| Bacteriophage lambda ning protein | SAMN04488524_0578 | Not Available | Negative | 743729 - 744280 | 21304.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

