Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein hflx | SAMN04488524_1980 | Not Available | Negative | 2378621 - 2379811 | 45485.9 |
| indole-3-glycerol phosphate synthase | SAMN04488524_1981 | Not Available | Negative | 2379834 - 2380625 | 28905.9 |
| anthranilate synthase component 2 | SAMN04488524_1982 | Not Available | Negative | 2380628 - 2381212 | 21702.8 |
| anthranilate synthase component 1 | SAMN04488524_1983 | Not Available | Negative | 2381217 - 2382629 | 53643.5 |
| hypothetical protein | SAMN04488524_1984 | Not Available | Negative | 2382863 - 2383318 | 16980.7 |
| hypothetical protein | SAMN04488524_1985 | Not Available | Negative | 2383402 - 2383992 | 21128.6 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN04488524_1986 | Not Available | Positive | 2384197 - 2384382 | 7056.41 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488524_1987 | Not Available | Negative | 2384422 - 2384862 | 16870.5 |
| pd-(d/e)xk nuclease family transposase | SAMN04488524_1988 | Not Available | Positive | 2385363 - 2385698 | 12882.2 |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN04488524_1989 | Not Available | Positive | 2385912 - 2386310 | 14844.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

