Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04488524_1970 | Not Available | Negative | 2366045 - 2367448 | 55121.4 |
| aldehyde dehydrogenase (nad+) | SAMN04488524_1971 | Not Available | Positive | 2367694 - 2369235 | 55159.3 |
| helicase conserved c-terminal domain-containing protein | SAMN04488524_1972 | Not Available | Positive | 2369407 - 2372301 | 112191.0 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN04488524_1973 | Not Available | Negative | 2372294 - 2372929 | 23873.7 |
| protein of unknown function | SAMN04488524_1974 | Not Available | Positive | 2372980 - 2374407 | 54492.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488524_1975 | Not Available | Positive | 2374417 - 2375625 | 45329.8 |
| uncharacterized conserved protein | SAMN04488524_1976 | Not Available | Negative | 2375629 - 2376609 | 37676.4 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04488524_1977 | Not Available | Positive | 2376664 - 2377545 | 32077.2 |
| tonb family c-terminal domain-containing protein | SAMN04488524_1978 | Not Available | Negative | 2377554 - 2378207 | 24640.8 |
| ribosome-binding factor a | SAMN04488524_1979 | Not Available | Negative | 2378216 - 2378590 | 14085.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

