Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488524_1910 | Not Available | Negative | 2281110 - 2281973 | 33289.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1911 | Not Available | Positive | 2282213 - 2285386 | 115703.0 |
| starch-binding associating with outer membrane | SAMN04488524_1912 | Not Available | Positive | 2285404 - 2287053 | 61228.2 |
| hypothetical protein | SAMN04488524_1913 | Not Available | Positive | 2287092 - 2288117 | 36566.6 |
| mannan endo-1,4-beta-mannosidase | SAMN04488524_1914 | Not Available | Positive | 2288101 - 2289231 | 42833.3 |
| na+/proline symporter | SAMN04488524_1915 | Not Available | Positive | 2289233 - 2291059 | 68603.5 |
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | SAMN04488524_1916 | Not Available | Positive | 2291069 - 2292259 | 44782.8 |
| mannobiose 2-epimerase | SAMN04488524_1917 | Not Available | Positive | 2292241 - 2293404 | 44614.6 |
| queuosine biosynthesis protein quec | SAMN04488524_1918 | Not Available | Negative | 2293704 - 2295587 | 71227.1 |
| hypothetical protein | SAMN04488524_1919 | Not Available | Negative | 2295580 - 2296368 | 30254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

