Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | SAMN04488524_1880 | Not Available | Negative | 2226808 - 2228004 | 45316.0 |
| alpha-l-fucosidase | SAMN04488524_1881 | Not Available | Negative | 2228030 - 2229433 | 53060.0 |
| starch-binding associating with outer membrane | SAMN04488524_1882 | Not Available | Negative | 2229469 - 2231256 | 67421.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1883 | Not Available | Negative | 2231293 - 2234508 | 119469.0 |
| hypothetical protein | SAMN04488524_1884 | Not Available | Negative | 2234886 - 2236838 | 69349.5 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04488524_1885 | Not Available | Negative | 2236844 - 2238607 | 64267.6 |
| peptidase m60, enhancin and enhancin-like | SAMN04488524_1886 | Not Available | Negative | 2238641 - 2240095 | 54629.3 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04488524_1887 | Not Available | Negative | 2240108 - 2241871 | 65294.5 |
| protein of unknown function | SAMN04488524_1888 | Not Available | Negative | 2241885 - 2243555 | 59684.2 |
| fasciclin domain-containing protein | SAMN04488524_1889 | Not Available | Negative | 2243539 - 2244279 | 27665.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

