Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04488524_1869 | Not Available | Negative | 2212855 - 2213547 | 25447.9 |
| carboxypepd_reg-like domain-containing protein | SAMN04488524_1870 | Not Available | Negative | 2213611 - 2216286 | 100403.0 |
| glpgli family protein | SAMN04488524_1871 | Not Available | Negative | 2216300 - 2217145 | 31837.9 |
| hypothetical protein | SAMN04488524_1872 | Not Available | Negative | 2217245 - 2217532 | 10020.8 |
| hypothetical protein | SAMN04488524_1873 | Not Available | Negative | 2217622 - 2217951 | 11904.0 |
| hypothetical protein | SAMN04488524_1875 | Not Available | Negative | 2218385 - 2218852 | 17161.6 |
| transcriptional regulator, arsr family | SAMN04488524_1876 | Not Available | Negative | 2218909 - 2219238 | 11942.7 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488524_1877 | Not Available | Negative | 2219328 - 2220218 | 32409.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488524_1878 | Not Available | Negative | 2220232 - 2225172 | 167679.0 |
| hypothetical protein | SAMN04488524_1879 | Not Available | Negative | 2225545 - 2226798 | 46853.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

