Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | SAMN04488524_1859 | Not Available | Negative | 2201257 - 2203242 | 74407.9 |
| hypothetical protein | SAMN04488524_1860 | Not Available | Negative | 2203256 - 2204182 | 36279.8 |
| amidohydrolase | SAMN04488524_1861 | Not Available | Negative | 2204200 - 2205387 | 43402.2 |
| sporulation related domain-containing protein | SAMN04488524_1862 | Not Available | Negative | 2205384 - 2205884 | 19053.3 |
| protein translocase subunit seca | SAMN04488524_1863 | Not Available | Negative | 2205904 - 2209212 | 124182.0 |
| hypothetical protein | SAMN04488524_1864 | Not Available | Negative | 2209332 - 2209631 | 11246.6 |
| hypothetical protein | SAMN04488524_1865 | Not Available | Negative | 2209682 - 2210311 | 24095.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1866 | Not Available | Negative | 2210298 - 2210798 | 19801.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04488524_1867 | Not Available | Positive | 2210872 - 2211768 | 33901.2 |
| conserved hypothetical integral membrane protein | SAMN04488524_1868 | Not Available | Positive | 2211842 - 2212762 | 32582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

