Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN04488524_1828 | Not Available | Negative | 2165378 - 2166745 | 50356.9 |
| susd family protein | SAMN04488524_1829 | Not Available | Negative | 2166757 - 2168250 | 55273.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1830 | Not Available | Negative | 2168262 - 2171939 | 136758.0 |
| fecr family protein | SAMN04488524_1831 | Not Available | Negative | 2172104 - 2173306 | 43749.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1832 | Not Available | Negative | 2173411 - 2174031 | 23884.2 |
| putative membrane protein | SAMN04488524_1833 | Not Available | Negative | 2174194 - 2174730 | 20072.7 |
| protein sco1/2 | SAMN04488524_1834 | Not Available | Negative | 2174743 - 2175450 | 26428.8 |
| cytochrome c oxidase subunit iv | SAMN04488524_1835 | Not Available | Negative | 2175450 - 2175809 | 13647.2 |
| cytochrome c oxidase subunit 3 | SAMN04488524_1836 | Not Available | Negative | 2175829 - 2176536 | 26842.0 |
| cytochrome c oxidase subunit 3 | SAMN04488524_1837 | Not Available | Negative | 2176567 - 2177157 | 22062.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

