Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488524_1818 | Not Available | Negative | 2157291 - 2158454 | 43574.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1819 | Not Available | Negative | 2158512 - 2159045 | 20826.1 |
| hypothetical protein | SAMN04488524_1820 | Not Available | Positive | 2159278 - 2159928 | 23169.7 |
| hypothetical protein | SAMN04488524_1821 | Not Available | Positive | 2159975 - 2160355 | 14527.7 |
| hypothetical protein | SAMN04488524_1822 | Not Available | Positive | 2160295 - 2160828 | 19336.2 |
| hypothetical protein | SAMN04488524_1823 | Not Available | Positive | 2160833 - 2161471 | 23701.0 |
| hypothetical protein | SAMN04488524_1824 | Not Available | Positive | 2162148 - 2163224 | 39590.4 |
| hypothetical protein | SAMN04488524_1825 | Not Available | Negative | 2163336 - 2163752 | 15451.2 |
| hypothetical protein | SAMN04488524_1826 | Not Available | Negative | 2163838 - 2164008 | 6489.4 |
| protein of unknown function | SAMN04488524_1827 | Not Available | Negative | 2164028 - 2165347 | 48510.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

