Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1808 | Not Available | Negative | 2143517 - 2144266 | 29044.7 |
| hypothetical protein | SAMN04488524_1809 | Not Available | Negative | 2144263 - 2144937 | 24680.0 |
| atp-dependent dna helicase recg | SAMN04488524_1810 | Not Available | Positive | 2145115 - 2146473 | 51760.6 |
| hypothetical protein | SAMN04488524_1811 | Not Available | Positive | 2146561 - 2147277 | 26375.3 |
| hypothetical protein | SAMN04488524_1812 | Not Available | Negative | 2147558 - 2147830 | 9938.96 |
| hypothetical protein | SAMN04488524_1813 | Not Available | Negative | 2147900 - 2149213 | 49488.1 |
| protein of unknown function | SAMN04488524_1814 | Not Available | Negative | 2149300 - 2150634 | 48008.2 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN04488524_1815 | Not Available | Negative | 2150646 - 2152043 | 51779.7 |
| susd family protein | SAMN04488524_1816 | Not Available | Negative | 2152062 - 2153504 | 54382.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1817 | Not Available | Negative | 2153516 - 2157163 | 134601.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

