Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1788 | Not Available | Positive | 2123638 - 2124240 | 22787.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488524_1789 | Not Available | Negative | 2124298 - 2125719 | 52319.6 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN04488524_1790 | Not Available | Positive | 2125839 - 2126423 | 22658.0 |
| arsenite transporter, acr3 family | SAMN04488524_1791 | Not Available | Negative | 2126439 - 2127503 | 38731.8 |
| protein tyrosine phosphatase | SAMN04488524_1792 | Not Available | Negative | 2127504 - 2127920 | 15535.3 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488524_1793 | Not Available | Positive | 2128236 - 2129018 | 28985.0 |
| hypothetical protein | SAMN04488524_1794 | Not Available | Negative | 2129133 - 2129585 | 16541.1 |
| fecr family protein | SAMN04488524_1795 | Not Available | Positive | 2129839 - 2131122 | 47765.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1796 | Not Available | Positive | 2131355 - 2134891 | 131564.0 |
| susd family protein | SAMN04488524_1797 | Not Available | Positive | 2134927 - 2136327 | 53264.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

