Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trove domain-containing protein | SAMN04488524_1777 | Not Available | Positive | 2109681 - 2111258 | 59832.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_1779 | Not Available | Negative | 2112072 - 2113193 | 41788.3 |
| redoxin | SAMN04488524_1780 | Not Available | Negative | 2113236 - 2114369 | 41438.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_1781 | Not Available | Negative | 2114388 - 2115572 | 43040.7 |
| susd family protein | SAMN04488524_1782 | Not Available | Negative | 2115685 - 2117142 | 53460.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1783 | Not Available | Negative | 2117147 - 2120713 | 131360.0 |
| fecr family protein | SAMN04488524_1784 | Not Available | Negative | 2120905 - 2122080 | 43418.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1785 | Not Available | Negative | 2122179 - 2122769 | 23036.2 |
| hypothetical protein | SAMN04488524_1786 | Not Available | Negative | 2122977 - 2123372 | 14846.8 |
| hypothetical protein | SAMN04488524_1787 | Not Available | Positive | 2123403 - 2123585 | 7171.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

