Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488524_1757 | Not Available | Negative | 2091897 - 2093066 | 43199.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1758 | Not Available | Negative | 2093082 - 2093633 | 20914.5 |
| chemotaxis protein motb | SAMN04488524_1759 | Not Available | Negative | 2093745 - 2094587 | 31509.2 |
| tigr02453 family protein | SAMN04488524_1760 | Not Available | Negative | 2094670 - 2095332 | 25428.7 |
| protein of unknown function | SAMN04488524_1761 | Not Available | Negative | 2095329 - 2095727 | 15153.4 |
| hypothetical protein | SAMN04488524_1762 | Not Available | Negative | 2095711 - 2095965 | 9147.38 |
| helix-turn-helix | SAMN04488524_1763 | Not Available | Negative | 2095995 - 2096285 | 11047.3 |
| phage derived protein gp49-like | SAMN04488524_1764 | Not Available | Negative | 2096288 - 2096629 | 13610.9 |
| transcriptional regulator, arac family | SAMN04488524_1765 | Not Available | Positive | 2096962 - 2097735 | 29259.0 |
| hypothetical protein | SAMN04488524_1766 | Not Available | Positive | 2097802 - 2098206 | 14604.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

