Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, deor family | SAMN04488524_1747 | Not Available | Positive | 2074912 - 2075661 | 27465.6 |
| hypothetical protein | SAMN04488524_1748 | Not Available | Positive | 2075746 - 2077257 | 56399.2 |
| hypothetical protein | SAMN04488524_1749 | Not Available | Negative | 2077260 - 2078066 | 30653.2 |
| hypothetical protein | SAMN04488524_1750 | Not Available | Negative | 2078056 - 2079030 | 36407.8 |
| hypothetical protein | SAMN04488524_1751 | Not Available | Negative | 2079047 - 2079868 | 30769.9 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488524_1752 | Not Available | Negative | 2079855 - 2081375 | 55908.7 |
| copper binding protein, plastocyanin/azurin family | SAMN04488524_1753 | Not Available | Negative | 2081377 - 2082549 | 43287.5 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488524_1754 | Not Available | Negative | 2082565 - 2086734 | 151710.0 |
| starch-binding associating with outer membrane | SAMN04488524_1755 | Not Available | Negative | 2086927 - 2088399 | 54982.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1756 | Not Available | Negative | 2088411 - 2091716 | 120826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

