Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488524_1737 | Not Available | Negative | 2057493 - 2058860 | 49789.9 |
| hypothetical protein | SAMN04488524_1738 | Not Available | Positive | 2059070 - 2061028 | 72281.5 |
| na+/proline symporter | SAMN04488524_1739 | Not Available | Negative | 2061099 - 2062577 | 53772.2 |
| predicted dehydrogenase | SAMN04488524_1740 | Not Available | Negative | 2062614 - 2063666 | 37816.4 |
| protein of unknown function | SAMN04488524_1741 | Not Available | Negative | 2064098 - 2065162 | 38563.4 |
| starch-binding associating with outer membrane | SAMN04488524_1742 | Not Available | Negative | 2065198 - 2067027 | 66576.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1743 | Not Available | Negative | 2067046 - 2070243 | 116323.0 |
| alpha/beta hydrolase family protein | SAMN04488524_1744 | Not Available | Negative | 2070317 - 2071516 | 44403.0 |
| hypothetical protein | SAMN04488524_1745 | Not Available | Negative | 2071635 - 2073773 | 81298.5 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488524_1746 | Not Available | Negative | 2073904 - 2074737 | 29310.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

