Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488524_1727 | Not Available | Positive | 2046343 - 2046645 | 11676.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04488524_1728 | Not Available | Positive | 2046650 - 2047204 | 20755.7 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04488524_1729 | Not Available | Negative | 2047216 - 2048403 | 43012.0 |
| hypothetical protein | SAMN04488524_1730 | Not Available | Negative | 2048425 - 2048841 | 14432.9 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN04488524_1731 | Not Available | Negative | 2048869 - 2051016 | 79027.1 |
| hypothetical protein | SAMN04488524_1732 | Not Available | Negative | 2051029 - 2052375 | 49722.6 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN04488524_1733 | Not Available | Negative | 2052350 - 2053324 | 36653.0 |
| neutral/alkaline non-lysosomal ceramidase, n-terminal | SAMN04488524_1734 | Not Available | Negative | 2053339 - 2054706 | 50121.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488524_1735 | Not Available | Negative | 2054706 - 2056106 | 50928.3 |
| hypothetical protein | SAMN04488524_1736 | Not Available | Negative | 2056111 - 2057493 | 49834.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

