Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | SAMN04488524_1677 | Not Available | Negative | 1982755 - 1983525 | 29448.3 |
| protein of unknown function | SAMN04488524_1678 | Not Available | Negative | 1983544 - 1984527 | 37590.1 |
| dipeptidyl-peptidase iv serine peptidase. merops family s09b | SAMN04488524_1679 | Not Available | Negative | 1984685 - 1986787 | 79450.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_1680 | Not Available | Negative | 1986797 - 1988146 | 50402.5 |
| starch-binding associating with outer membrane | SAMN04488524_1681 | Not Available | Negative | 1988198 - 1989835 | 60777.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1682 | Not Available | Negative | 1989846 - 1993226 | 123620.0 |
| fecr family protein | SAMN04488524_1683 | Not Available | Negative | 1993380 - 1994522 | 41879.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1684 | Not Available | Negative | 1994607 - 1995188 | 22848.6 |
| hypothetical protein | SAMN04488524_1685 | Not Available | Negative | 1995237 - 1996754 | 56416.3 |
| pas fold-containing protein | SAMN04488524_1686 | Not Available | Negative | 1996854 - 1997630 | 30374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

