Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subcomplex a subunit | SAMN04488524_1667 | Not Available | Negative | 1969097 - 1970224 | 41709.7 |
| hypothetical protein | SAMN04488524_1668 | Not Available | Negative | 1970242 - 1970673 | 16317.0 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN04488524_1669 | Not Available | Negative | 1970674 - 1970898 | 8339.14 |
| hypothetical protein | SAMN04488524_1670 | Not Available | Positive | 1971000 - 1973789 | 105197.0 |
| penicillin-binding protein 1a | SAMN04488524_1671 | Not Available | Positive | 1973791 - 1976010 | 82957.2 |
| excinuclease abc subunit c | SAMN04488524_1672 | Not Available | Positive | 1976029 - 1977825 | 68914.6 |
| protein involved in gliding motility gldn | SAMN04488524_1673 | Not Available | Negative | 1977877 - 1978776 | 33974.8 |
| gliding motility-associated protein gldm | SAMN04488524_1674 | Not Available | Negative | 1978784 - 1980325 | 54829.4 |
| gliding motility-associated protein gldl | SAMN04488524_1675 | Not Available | Negative | 1980371 - 1981180 | 28965.5 |
| gliding motility-associated lipoprotein gldk | SAMN04488524_1676 | Not Available | Negative | 1981217 - 1982584 | 51033.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

