Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1657 | Not Available | Negative | 1960524 - 1961501 | 37807.5 |
| holliday junction endonuclease ruvc | SAMN04488524_1658 | Not Available | Positive | 1961545 - 1962108 | 20770.6 |
| protein of unknown function | SAMN04488524_1659 | Not Available | Negative | 1962114 - 1962959 | 32357.8 |
| hypothetical protein | SAMN04488524_1660 | Not Available | Negative | 1963107 - 1963322 | 7803.73 |
| conserved hypothetical protein | SAMN04488524_1661 | Not Available | Positive | 1963454 - 1965070 | 60116.3 |
| atp synthase f1 subcomplex gamma subunit | SAMN04488524_1662 | Not Available | Negative | 1965124 - 1966005 | 32094.7 |
| f-type h+-transporting atpase subunit alpha | SAMN04488524_1663 | Not Available | Negative | 1966037 - 1967611 | 56791.6 |
| atp synthase f1 subcomplex delta subunit | SAMN04488524_1664 | Not Available | Negative | 1967670 - 1968218 | 19934.3 |
| atp synthase f0 subcomplex b subunit | SAMN04488524_1665 | Not Available | Negative | 1968252 - 1968749 | 18613.8 |
| atp synthase f0 subcomplex c subunit | SAMN04488524_1666 | Not Available | Negative | 1968841 - 1969053 | 6643.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

