Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase (glutamine-hydrolysing) | SAMN04488524_1647 | Not Available | Negative | 1950432 - 1952072 | 60817.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488524_1648 | Not Available | Negative | 1952094 - 1952756 | 24146.7 |
| gliding motility-associated lipoprotein gldb | SAMN04488524_1649 | Not Available | Positive | 1952770 - 1953804 | 40480.7 |
| nte family protein | SAMN04488524_1650 | Not Available | Positive | 1953816 - 1954586 | 27736.1 |
| 2-phosphosulfolactate phosphatase | SAMN04488524_1651 | Not Available | Negative | 1954576 - 1955304 | 26734.3 |
| aminomethyltransferase | SAMN04488524_1652 | Not Available | Negative | 1955342 - 1956421 | 39728.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_1653 | Not Available | Negative | 1956463 - 1957665 | 46576.9 |
| rnase hii | SAMN04488524_1654 | Not Available | Negative | 1957690 - 1958295 | 22699.3 |
| peptide/nickel transport system permease protein | SAMN04488524_1655 | Not Available | Negative | 1958319 - 1959410 | 40131.6 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488524_1656 | Not Available | Negative | 1959410 - 1960546 | 42549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

