Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1607 | Not Available | Negative | 1896824 - 1897645 | 29905.0 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488524_1608 | Not Available | Positive | 1897891 - 1899039 | 43449.1 |
| glucose / sorbosone dehydrogenase | SAMN04488524_1609 | Not Available | Positive | 1899085 - 1900368 | 47198.4 |
| cytochrome c, mono-and diheme variants | SAMN04488524_1610 | Not Available | Positive | 1900378 - 1900827 | 15975.6 |
| hypothetical protein | SAMN04488524_1611 | Not Available | Negative | 1900894 - 1902510 | 58218.5 |
| hypothetical protein | SAMN04488524_1612 | Not Available | Negative | 1902558 - 1903343 | 28681.2 |
| starch-binding associating with outer membrane | SAMN04488524_1613 | Not Available | Negative | 1903355 - 1904947 | 59714.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1614 | Not Available | Negative | 1904965 - 1908108 | 115100.0 |
| poly(beta-d-mannuronate) lyase | SAMN04488524_1615 | Not Available | Negative | 1908355 - 1909851 | 53880.5 |
| polysaccharide lyase | SAMN04488524_1616 | Not Available | Positive | 1910080 - 1910874 | 29228.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

