Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN04488524_0128 | Not Available | Negative | 181708 - 184128 | 90824.4 |
| protein of unknown function | SAMN04488524_0129 | Not Available | Negative | 184136 - 185248 | 42910.0 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN04488524_0130 | Not Available | Negative | 185251 - 188022 | 102915.0 |
| transcriptional regulator, iclr family | SAMN04488524_0131 | Not Available | Positive | 188237 - 189016 | 28560.7 |
| mechanosensitive ion channel | SAMN04488524_0132 | Not Available | Positive | 189056 - 191503 | 92482.8 |
| thioredoxin-like domain-containing protein | SAMN04488524_0133 | Not Available | Positive | 191840 - 193057 | 45834.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_0134 | Not Available | Negative | 193318 - 194505 | 44630.5 |
| peroxiredoxin | SAMN04488524_0135 | Not Available | Negative | 194507 - 195664 | 41894.5 |
| pkd-like family protein | SAMN04488524_0136 | Not Available | Negative | 195704 - 197272 | 57515.9 |
| protein of unknown function | SAMN04488524_0137 | Not Available | Negative | 197316 - 198068 | 28549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

