Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN04488524_1567 | Not Available | Positive | 1840261 - 1840524 | 10482.5 |
| gdsl-like lipase/acylhydrolase | SAMN04488524_1568 | Not Available | Negative | 1841035 - 1842321 | 44762.6 |
| long-chain fatty acid transport protein | SAMN04488524_1569 | Not Available | Negative | 1842340 - 1843545 | 43354.4 |
| nitroreductase | SAMN04488524_1570 | Not Available | Positive | 1843785 - 1844417 | 23467.1 |
| hypothetical protein | SAMN04488524_1571 | Not Available | Positive | 1844551 - 1847277 | 100398.0 |
| phage shock protein c (pspc) family protein | SAMN04488524_1572 | Not Available | Negative | 1847280 - 1848833 | 59220.3 |
| padr family transcriptional regulator, regulatory protein padr | SAMN04488524_1573 | Not Available | Negative | 1848830 - 1849198 | 13825.7 |
| hypothetical protein | SAMN04488524_1574 | Not Available | Positive | 1849376 - 1849594 | 8414.68 |
| hypothetical protein | SAMN04488524_1575 | Not Available | Negative | 1849600 - 1850742 | 41629.2 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04488524_1576 | Not Available | Negative | 1850779 - 1853028 | 84866.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

