Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1547 | Not Available | Negative | 1818770 - 1819255 | 18990.1 |
| trna(ile)-lysidine synthase | SAMN04488524_1548 | Not Available | Negative | 1819328 - 1820668 | 50874.8 |
| osta-like protein | SAMN04488524_1549 | Not Available | Positive | 1820740 - 1822848 | 78972.0 |
| xtp/ditp diphosphohydrolase | SAMN04488524_1550 | Not Available | Negative | 1822823 - 1823401 | 21867.0 |
| hypothetical protein | SAMN04488524_1551 | Not Available | Negative | 1823403 - 1823972 | 20843.8 |
| hypothetical protein | SAMN04488524_1552 | Not Available | Positive | 1824078 - 1824668 | 22649.2 |
| periplasmic chaperone for outer membrane proteins sura | SAMN04488524_1553 | Not Available | Positive | 1824738 - 1826102 | 52292.7 |
| moxr-like atpase | SAMN04488524_1554 | Not Available | Positive | 1826109 - 1827071 | 35408.7 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488524_1555 | Not Available | Negative | 1827075 - 1827959 | 33718.4 |
| hypothetical protein | SAMN04488524_1556 | Not Available | Negative | 1828054 - 1828920 | 31861.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

