Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488524_1537 | Not Available | Positive | 1799004 - 1802990 | 151090.0 |
| protein of unknown function | SAMN04488524_1538 | Not Available | Negative | 1803153 - 1804589 | 53296.5 |
| protein of unknown function | SAMN04488524_1539 | Not Available | Negative | 1804612 - 1805904 | 48851.3 |
| starch-binding associating with outer membrane | SAMN04488524_1540 | Not Available | Negative | 1805949 - 1807907 | 74481.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1541 | Not Available | Negative | 1807921 - 1811172 | 120634.0 |
| hexosaminidase | SAMN04488524_1542 | Not Available | Negative | 1811603 - 1813462 | 69606.8 |
| transglycosylase slt domain-containing protein | SAMN04488524_1543 | Not Available | Negative | 1813776 - 1814615 | 31690.8 |
| 23s rrna pseudouridine2605 synthase | SAMN04488524_1544 | Not Available | Positive | 1815055 - 1816425 | 52387.7 |
| 6-phosphogluconolactonase | SAMN04488524_1545 | Not Available | Positive | 1816429 - 1817547 | 40475.1 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN04488524_1546 | Not Available | Negative | 1817550 - 1818701 | 42973.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

