Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04488524_1527 | Not Available | Positive | 1789388 - 1789879 | 17230.6 |
| bacillithiol system protein ytxj | SAMN04488524_1528 | Not Available | Positive | 1790102 - 1790434 | 12548.7 |
| uncharacterized osmc-related protein | SAMN04488524_1529 | Not Available | Negative | 1790424 - 1790828 | 14715.5 |
| heat shock protein hslj | SAMN04488524_1530 | Not Available | Positive | 1790920 - 1791339 | 15338.9 |
| lipoic acid synthetase | SAMN04488524_1531 | Not Available | Positive | 1791408 - 1792286 | 33049.7 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related | SAMN04488524_1532 | Not Available | Negative | 1792292 - 1793224 | 33236.6 |
| excinuclease abc subunit a | SAMN04488524_1533 | Not Available | Negative | 1793235 - 1796078 | 105809.0 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN04488524_1534 | Not Available | Negative | 1796174 - 1797220 | 39307.3 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488524_1535 | Not Available | Negative | 1797391 - 1798479 | 42019.7 |
| hypothetical protein | SAMN04488524_1536 | Not Available | Negative | 1798520 - 1798687 | 6251.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

