Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, deor family | SAMN04488524_1507 | Not Available | Positive | 1768044 - 1768808 | 27780.8 |
| nhl repeat-containing protein | SAMN04488524_1508 | Not Available | Positive | 1769163 - 1770524 | 50553.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1509 | Not Available | Positive | 1770631 - 1773762 | 116353.0 |
| starch-binding associating with outer membrane | SAMN04488524_1510 | Not Available | Positive | 1773784 - 1775805 | 75758.5 |
| protein of unknown function | SAMN04488524_1511 | Not Available | Positive | 1775828 - 1776724 | 33473.3 |
| octaprenyl-diphosphate synthase | SAMN04488524_1512 | Not Available | Negative | 1776795 - 1777766 | 36591.4 |
| esterase/lipase | SAMN04488524_1513 | Not Available | Positive | 1777840 - 1778829 | 36731.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488524_1514 | Not Available | Negative | 1778826 - 1780241 | 51361.9 |
| asparaginase | SAMN04488524_1515 | Not Available | Negative | 1780276 - 1781295 | 37794.5 |
| tatd dnase family protein | SAMN04488524_1516 | Not Available | Negative | 1781299 - 1782066 | 28809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

