Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-bisphosphate carboxylase large chain | SAMN04488524_0118 | Not Available | Negative | 167461 - 168705 | 44877.9 |
| hypothetical protein | SAMN04488524_0119 | Not Available | Negative | 168716 - 170746 | 75999.9 |
| f5/8 type c domain-containing protein | SAMN04488524_0120 | Not Available | Negative | 170758 - 174123 | 124383.0 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488524_0121 | Not Available | Negative | 174126 - 175418 | 46128.5 |
| acyl dehydratase | SAMN04488524_0122 | Not Available | Negative | 175440 - 175880 | 16821.2 |
| predicted dehydrogenase | SAMN04488524_0123 | Not Available | Negative | 175892 - 176974 | 39987.3 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04488524_0124 | Not Available | Negative | 176978 - 178210 | 45678.0 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04488524_0125 | Not Available | Negative | 178191 - 179366 | 43047.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04488524_0126 | Not Available | Negative | 179363 - 180520 | 42045.8 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04488524_0127 | Not Available | Negative | 180517 - 181677 | 43094.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

