Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN04488524_1497 | Not Available | Negative | 1753348 - 1754037 | 25966.9 |
| mfs transporter, opa family, glycerol-3-phosphate transporter | SAMN04488524_1498 | Not Available | Negative | 1754050 - 1755399 | 49984.3 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488524_1499 | Not Available | Negative | 1755443 - 1756345 | 33736.3 |
| hypothetical protein | SAMN04488524_1500 | Not Available | Negative | 1756345 - 1757310 | 35491.5 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN04488524_1501 | Not Available | Negative | 1757339 - 1758751 | 53360.2 |
| hypothetical protein | SAMN04488524_1502 | Not Available | Negative | 1758832 - 1759317 | 18118.6 |
| hypothetical protein | SAMN04488524_1503 | Not Available | Negative | 1759476 - 1761074 | 57107.7 |
| starch-binding associating with outer membrane | SAMN04488524_1504 | Not Available | Negative | 1761086 - 1762657 | 58706.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1505 | Not Available | Negative | 1762669 - 1765914 | 118215.0 |
| glycerol-3-phosphate dehydrogenase | SAMN04488524_1506 | Not Available | Negative | 1766234 - 1767844 | 58658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

