Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488524_1487 | Not Available | Positive | 1740786 - 1742372 | 59253.2 |
| peptidyl-trna hydrolase, pth1 family | SAMN04488524_1488 | Not Available | Negative | 1742362 - 1742922 | 20608.1 |
| large subunit ribosomal protein l25 | SAMN04488524_1489 | Not Available | Negative | 1743061 - 1743639 | 21375.2 |
| ribose-phosphate pyrophosphokinase | SAMN04488524_1490 | Not Available | Negative | 1743670 - 1744611 | 34230.6 |
| Trna-gln | Not Available | Not Available | Positive | 1744680 - 1744753 | Not Available |
| protein of unknown function | SAMN04488524_1492 | Not Available | Positive | 1745182 - 1748208 | 114397.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | SAMN04488524_1493 | Not Available | Negative | 1748566 - 1749528 | 36191.9 |
| beta-phosphoglucomutase | SAMN04488524_1494 | Not Available | Negative | 1749553 - 1750218 | 23791.6 |
| glycosidase | SAMN04488524_1495 | Not Available | Negative | 1750225 - 1752072 | 70400.9 |
| linoleoyl-coa desaturase | SAMN04488524_1496 | Not Available | Positive | 1752237 - 1753355 | 42727.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

