Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l23 | SAMN04488524_1467 | Not Available | Negative | 1721195 - 1721485 | 10620.1 |
| lsu ribosomal protein l4p | SAMN04488524_1468 | Not Available | Negative | 1721487 - 1722116 | 23080.8 |
| large subunit ribosomal protein l3 | SAMN04488524_1469 | Not Available | Negative | 1722121 - 1722738 | 21851.5 |
| uncharacterized membrane protein | SAMN04488524_1470 | Not Available | Negative | 1722920 - 1723315 | 14277.8 |
| hypothetical protein | SAMN04488524_1471 | Not Available | Negative | 1723312 - 1724148 | 28856.7 |
| hypothetical protein | SAMN04488524_1472 | Not Available | Positive | 1724237 - 1724842 | 22854.5 |
| ssu ribosomal protein s10p | SAMN04488524_1473 | Not Available | Negative | 1724915 - 1725220 | 11404.1 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN04488524_1474 | Not Available | Negative | 1725286 - 1727400 | 77657.0 |
| ssu ribosomal protein s7p | SAMN04488524_1475 | Not Available | Negative | 1727418 - 1727885 | 17531.5 |
| ssu ribosomal protein s12p | SAMN04488524_1476 | Not Available | Negative | 1727902 - 1728315 | 15037.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

