Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l5p | SAMN04488524_1457 | Not Available | Negative | 1716563 - 1717129 | 21261.1 |
| large subunit ribosomal protein l24 | SAMN04488524_1458 | Not Available | Negative | 1717129 - 1717467 | 11859.8 |
| lsu ribosomal protein l14p | SAMN04488524_1459 | Not Available | Negative | 1717469 - 1717837 | 13364.4 |
| small subunit ribosomal protein s17 | SAMN04488524_1460 | Not Available | Negative | 1717839 - 1718093 | 9783.21 |
| large subunit ribosomal protein l29 | SAMN04488524_1461 | Not Available | Negative | 1718107 - 1718316 | 7849.46 |
| lsu ribosomal protein l16p | SAMN04488524_1462 | Not Available | Negative | 1718389 - 1718811 | 15962.9 |
| ssu ribosomal protein s3p | SAMN04488524_1463 | Not Available | Negative | 1718850 - 1719704 | 30761.1 |
| lsu ribosomal protein l22p | SAMN04488524_1464 | Not Available | Negative | 1719710 - 1720072 | 13703.8 |
| small subunit ribosomal protein s19 | SAMN04488524_1465 | Not Available | Negative | 1720080 - 1720346 | 10003.1 |
| lsu ribosomal protein l2p | SAMN04488524_1466 | Not Available | Negative | 1720346 - 1721170 | 29885.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

