Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase | SAMN04488524_1437 | Not Available | Positive | 1702808 - 1703707 | 33864.2 |
| molecular chaperone dnak | SAMN04488524_1438 | Not Available | Negative | 1703777 - 1705696 | 68688.2 |
| methyltransferase domain-containing protein | SAMN04488524_1439 | Not Available | Negative | 1705862 - 1707079 | 46029.9 |
| 2'-5' rna ligase | SAMN04488524_1440 | Not Available | Positive | 1707137 - 1707688 | 21419.7 |
| lsu ribosomal protein l17p | SAMN04488524_1441 | Not Available | Negative | 1707746 - 1708285 | 19863.8 |
| dna-directed rna polymerase subunit alpha | SAMN04488524_1442 | Not Available | Negative | 1708377 - 1709369 | 37183.9 |
| small subunit ribosomal protein s4 | SAMN04488524_1443 | Not Available | Negative | 1709447 - 1710055 | 22997.7 |
| ssu ribosomal protein s11p | SAMN04488524_1444 | Not Available | Negative | 1710121 - 1710510 | 13788.8 |
| ssu ribosomal protein s13p | SAMN04488524_1445 | Not Available | Negative | 1710532 - 1710909 | 14104.3 |
| lsu ribosomal protein l36p | SAMN04488524_1446 | Not Available | Negative | 1711023 - 1711139 | 4518.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

