Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04488524_1427 | Not Available | Positive | 1690702 - 1692330 | 59447.1 |
| carbonic anhydrase | SAMN04488524_1428 | Not Available | Negative | 1692576 - 1693247 | 24565.4 |
| sulfate permease, sulp family | SAMN04488524_1429 | Not Available | Negative | 1693253 - 1694857 | 57304.6 |
| hypothetical protein | SAMN04488524_1430 | Not Available | Negative | 1694941 - 1695279 | 12807.6 |
| hypothetical protein | SAMN04488524_1431 | Not Available | Positive | 1695487 - 1696722 | 45775.0 |
| propionyl-coa carboxylase beta chain | SAMN04488524_1432 | Not Available | Positive | 1696758 - 1698299 | 56498.6 |
| predicted arabinose efflux permease, mfs family | SAMN04488524_1433 | Not Available | Positive | 1698299 - 1699462 | 42329.1 |
| predicted n-acyltransferase, gnat family | SAMN04488524_1434 | Not Available | Positive | 1699462 - 1699884 | 16028.3 |
| putative aminopeptidase frvx | SAMN04488524_1435 | Not Available | Positive | 1699936 - 1701054 | 41589.7 |
| hypothetical protein | SAMN04488524_1436 | Not Available | Positive | 1701156 - 1702709 | 56574.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

