Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488524_1417 | Not Available | Negative | 1677074 - 1677511 | 15808.5 |
| starch-binding associating with outer membrane | SAMN04488524_1418 | Not Available | Negative | 1677583 - 1679139 | 58274.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1419 | Not Available | Negative | 1679180 - 1682488 | 123467.0 |
| fecr family protein | SAMN04488524_1420 | Not Available | Negative | 1682722 - 1683849 | 41485.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1421 | Not Available | Negative | 1683917 - 1684519 | 23386.5 |
| hypothetical protein | SAMN04488524_1422 | Not Available | Negative | 1684632 - 1685276 | 24528.6 |
| hypothetical protein | SAMN04488524_1423 | Not Available | Positive | 1685491 - 1686711 | 46185.8 |
| putative porin | SAMN04488524_1424 | Not Available | Negative | 1686708 - 1688756 | 78665.0 |
| purine-nucleoside phosphorylase | SAMN04488524_1425 | Not Available | Negative | 1688756 - 1689571 | 29941.4 |
| lipid-a-disaccharide kinase | SAMN04488524_1426 | Not Available | Negative | 1689543 - 1690613 | 40235.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

