Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0108 | Not Available | Negative | 154415 - 154978 | 21703.2 |
| hypothetical protein | SAMN04488524_0109 | Not Available | Negative | 155008 - 155367 | 13771.5 |
| arylsulfatase a | SAMN04488524_0110 | Not Available | Positive | 155564 - 156970 | 52557.0 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN04488524_0111 | Not Available | Negative | 157284 - 158306 | 36781.7 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04488524_0112 | Not Available | Negative | 158318 - 160231 | 71466.2 |
| hypothetical protein | SAMN04488524_0113 | Not Available | Negative | 160327 - 162639 | 87716.7 |
| sialate o-acetylesterase | SAMN04488524_0114 | Not Available | Negative | 162639 - 164090 | 53043.4 |
| bile acid:na+ symporter, bass family | SAMN04488524_0115 | Not Available | Negative | 164083 - 165387 | 46885.1 |
| aspartate/glutamate racemase | SAMN04488524_0116 | Not Available | Negative | 165393 - 166055 | 23287.6 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN04488524_0117 | Not Available | Negative | 166076 - 167452 | 48654.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

