Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1387 | Not Available | Positive | 1639343 - 1639957 | 23878.9 |
| fecr family protein | SAMN04488524_1388 | Not Available | Positive | 1640038 - 1641195 | 42694.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1389 | Not Available | Positive | 1641373 - 1644762 | 125050.0 |
| susd family protein | SAMN04488524_1390 | Not Available | Positive | 1644774 - 1646300 | 56671.2 |
| thioredoxin | SAMN04488524_1391 | Not Available | Positive | 1646382 - 1647581 | 44289.3 |
| peroxiredoxin | SAMN04488524_1392 | Not Available | Positive | 1647615 - 1648775 | 44589.8 |
| hypothetical protein | SAMN04488524_1393 | Not Available | Positive | 1648819 - 1649355 | 19663.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1394 | Not Available | Positive | 1649554 - 1650114 | 21244.1 |
| fecr family protein | SAMN04488524_1395 | Not Available | Positive | 1650183 - 1651226 | 39590.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1396 | Not Available | Positive | 1651353 - 1654739 | 123918.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

