Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s oxidoreductase | SAMN04488524_1377 | Not Available | Negative | 1623933 - 1626848 | 107821.0 |
| aldehyde dehydrogenase (nad+) | SAMN04488524_1378 | Not Available | Negative | 1626853 - 1628385 | 55132.0 |
| protein of unknown function | SAMN04488524_1379 | Not Available | Negative | 1628398 - 1629303 | 34659.9 |
| saccharopine dehydrogenase, nadp-dependent | SAMN04488524_1380 | Not Available | Negative | 1629315 - 1630406 | 39739.8 |
| transcriptional regulator, lysr family | SAMN04488524_1381 | Not Available | Positive | 1630486 - 1631382 | 33524.5 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04488524_1382 | Not Available | Positive | 1631454 - 1632332 | 34697.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1383 | Not Available | Positive | 1632305 - 1632946 | 24527.8 |
| fecr family protein | SAMN04488524_1384 | Not Available | Positive | 1633014 - 1634108 | 40306.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1385 | Not Available | Positive | 1634372 - 1637824 | 128874.0 |
| susd family protein | SAMN04488524_1386 | Not Available | Positive | 1637834 - 1639192 | 50820.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

