Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1367 | Not Available | Positive | 1610813 - 1611067 | 9773.34 |
| hypothetical protein | SAMN04488524_1368 | Not Available | Positive | 1611189 - 1611401 | 7922.56 |
| conserved hypothetical integral membrane protein | SAMN04488524_1369 | Not Available | Negative | 1611635 - 1612891 | 44885.2 |
| phytoene dehydrogenase-related protein | SAMN04488524_1370 | Not Available | Negative | 1612911 - 1614344 | 51094.6 |
| hypothetical protein | SAMN04488524_1371 | Not Available | Negative | 1614346 - 1615866 | 59310.4 |
| hypothetical protein | SAMN04488524_1372 | Not Available | Negative | 1615848 - 1617302 | 55588.8 |
| hypothetical protein | SAMN04488524_1373 | Not Available | Negative | 1617306 - 1618601 | 49785.4 |
| ragb/susd domain-containing protein | SAMN04488524_1374 | Not Available | Negative | 1618619 - 1619992 | 51512.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1375 | Not Available | Negative | 1620010 - 1623096 | 113469.0 |
| hypothetical protein | SAMN04488524_1376 | Not Available | Positive | 1623496 - 1623936 | 16377.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

