Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1356 | Not Available | Negative | 1604943 - 1605602 | 24252.1 |
| hypothetical protein | SAMN04488524_1357 | Not Available | Negative | 1605578 - 1606156 | 21192.4 |
| hypothetical protein | SAMN04488524_1358 | Not Available | Negative | 1606096 - 1606446 | 13369.1 |
| hypothetical protein | SAMN04488524_1360 | Not Available | Negative | 1607350 - 1607511 | 6177.28 |
| hypothetical protein | SAMN04488524_1361 | Not Available | Negative | 1607566 - 1607754 | 7152.37 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488524_1362 | Not Available | Positive | 1607858 - 1608340 | 18539.2 |
| hypothetical protein | SAMN04488524_1363 | Not Available | Positive | 1608467 - 1609486 | 39696.5 |
| response regulator receiver domain-containing protein | SAMN04488524_1364 | Not Available | Positive | 1609636 - 1609995 | 13686.7 |
| response regulator receiver domain-containing protein | SAMN04488524_1365 | Not Available | Positive | 1610053 - 1610424 | 13886.0 |
| hypothetical protein | SAMN04488524_1366 | Not Available | Positive | 1610578 - 1610796 | 8077.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

