Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN04488524_1336 | Not Available | Negative | 1582417 - 1582995 | 21855.2 |
| hypothetical protein | SAMN04488524_1337 | Not Available | Positive | 1583073 - 1583504 | 16629.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04488524_1338 | Not Available | Negative | 1583501 - 1584187 | 26104.4 |
| hypothetical protein | SAMN04488524_1339 | Not Available | Negative | 1584346 - 1584786 | 16807.4 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04488524_1340 | Not Available | Negative | 1584855 - 1585643 | 30319.6 |
| esterase/lipase superfamily enzyme | SAMN04488524_1341 | Not Available | Negative | 1585687 - 1586415 | 28306.8 |
| gdsl-like lipase/acylhydrolase family protein | SAMN04488524_1342 | Not Available | Negative | 1586458 - 1587051 | 23381.1 |
| hypothetical protein | SAMN04488524_1343 | Not Available | Negative | 1587127 - 1587468 | 13098.2 |
| hypothetical protein | SAMN04488524_1344 | Not Available | Positive | 1587634 - 1587762 | 4824.16 |
| signal transduction histidine kinase | SAMN04488524_1345 | Not Available | Positive | 1587789 - 1589078 | 48559.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

