Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488524_1286 | Not Available | Negative | 1521891 - 1523327 | 54453.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1287 | Not Available | Negative | 1523345 - 1526806 | 127242.0 |
| fecr family protein | SAMN04488524_1288 | Not Available | Negative | 1526970 - 1528109 | 42025.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1289 | Not Available | Negative | 1528189 - 1528767 | 22558.4 |
| hpp family protein | SAMN04488524_1290 | Not Available | Negative | 1528872 - 1529459 | 21285.9 |
| fecr family protein | SAMN04488524_1291 | Not Available | Positive | 1529647 - 1530825 | 42820.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1292 | Not Available | Positive | 1530885 - 1531451 | 21957.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1293 | Not Available | Positive | 1531782 - 1535156 | 125319.0 |
| susd family protein | SAMN04488524_1294 | Not Available | Positive | 1535156 - 1536667 | 56036.8 |
| protein of unknown function | SAMN04488524_1295 | Not Available | Positive | 1536675 - 1537598 | 33426.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

