Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s12p methylthiotransferase | SAMN04488524_1266 | Not Available | Positive | 1495678 - 1497012 | 50285.3 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN04488524_1267 | Not Available | Positive | 1497059 - 1498645 | 59984.0 |
| malate dehydrogenase (nad) | SAMN04488524_1268 | Not Available | Positive | 1498651 - 1499736 | 38800.4 |
| signal peptidase i | SAMN04488524_1269 | Not Available | Negative | 1499733 - 1500941 | 46537.8 |
| dihydrodipicolinate reductase | SAMN04488524_1270 | Not Available | Negative | 1500948 - 1501688 | 27312.6 |
| hypothetical protein | SAMN04488524_1271 | Not Available | Negative | 1501699 - 1502307 | 22295.2 |
| chromosome partitioning protein, parb family | SAMN04488524_1272 | Not Available | Negative | 1502307 - 1503227 | 34504.7 |
| chromosome segregation atpase | SAMN04488524_1273 | Not Available | Negative | 1503238 - 1504041 | 29494.8 |
| nad(p)h-dependent fmn reductase | SAMN04488524_1274 | Not Available | Positive | 1504224 - 1504745 | 19342.3 |
| hypothetical protein | SAMN04488524_1275 | Not Available | Negative | 1504732 - 1505190 | 17277.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

