Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1256 | Not Available | Negative | 1484187 - 1484462 | 10428.2 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN04488524_1257 | Not Available | Negative | 1484465 - 1485313 | 30564.6 |
| predicted zn-dependent peptidase | SAMN04488524_1258 | Not Available | Positive | 1485512 - 1488457 | 110389.0 |
| hypothetical protein | SAMN04488524_1259 | Not Available | Positive | 1488566 - 1490980 | 89849.2 |
| acetyl-coenzyme a synthetase | SAMN04488524_1260 | Not Available | Negative | 1491023 - 1492921 | 70711.8 |
| hypothetical protein | SAMN04488524_1261 | Not Available | Negative | 1493098 - 1493538 | 16775.1 |
| lsu ribosomal protein l28p | SAMN04488524_1262 | Not Available | Positive | 1493987 - 1494220 | 8900.0 |
| large subunit ribosomal protein l33 | SAMN04488524_1263 | Not Available | Positive | 1494261 - 1494443 | 6984.71 |
| protein of unknown function | SAMN04488524_1264 | Not Available | Positive | 1494480 - 1494638 | 5694.01 |
| fused signal recognition particle receptor | SAMN04488524_1265 | Not Available | Positive | 1494711 - 1495673 | 34813.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

