Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488524_1216 | Not Available | Negative | 1428906 - 1430000 | 40268.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1217 | Not Available | Negative | 1430088 - 1430666 | 22774.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_1218 | Not Available | Negative | 1430922 - 1432136 | 44986.2 |
| disulphide bond corrector protein dsbc | SAMN04488524_1219 | Not Available | Negative | 1432294 - 1432746 | 16650.4 |
| peroxiredoxin | SAMN04488524_1220 | Not Available | Negative | 1432810 - 1433901 | 40505.9 |
| peroxiredoxin | SAMN04488524_1221 | Not Available | Negative | 1433904 - 1434980 | 39948.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_1222 | Not Available | Negative | 1435007 - 1436107 | 40611.8 |
| peroxiredoxin | SAMN04488524_1223 | Not Available | Negative | 1436117 - 1437427 | 48133.8 |
| susd family protein | SAMN04488524_1224 | Not Available | Negative | 1437499 - 1438932 | 53153.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1225 | Not Available | Negative | 1438963 - 1442514 | 129576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

