Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase, house-cleaning role in reducing lipid peroxides | SAMN04488524_0088 | Not Available | Negative | 123214 - 124371 | 43487.5 |
| starch-binding associating with outer membrane | SAMN04488524_0089 | Not Available | Negative | 124371 - 125795 | 52834.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0090 | Not Available | Negative | 125808 - 129281 | 127033.0 |
| fecr family protein | SAMN04488524_0091 | Not Available | Negative | 129469 - 130620 | 42785.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0092 | Not Available | Negative | 130715 - 131395 | 26378.8 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04488524_0093 | Not Available | Negative | 131547 - 132125 | 23209.2 |
| phopq-activated pathogenicity-related protein | SAMN04488524_0094 | Not Available | Negative | 132148 - 133362 | 45149.2 |
| hypothetical protein | SAMN04488524_0095 | Not Available | Negative | 133420 - 134325 | 32765.6 |
| two component regulator propeller | SAMN04488524_0096 | Not Available | Negative | 134337 - 138419 | 154509.0 |
| aldose 1-epimerase | SAMN04488524_0097 | Not Available | Negative | 138518 - 139693 | 42788.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

