Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488524_1173 | Not Available | Negative | 1376612 - 1377961 | 50148.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1174 | Not Available | Negative | 1377974 - 1381591 | 134111.0 |
| fecr family protein | SAMN04488524_1175 | Not Available | Negative | 1381791 - 1383029 | 45495.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1176 | Not Available | Negative | 1383101 - 1383685 | 22558.6 |
| n-acylglucosamine 2-epimerase | SAMN04488524_1177 | Not Available | Negative | 1383744 - 1384958 | 47213.9 |
| sialidase-1 | SAMN04488524_1178 | Not Available | Negative | 1384964 - 1386529 | 57112.0 |
| sugar phosphate permease | SAMN04488524_1179 | Not Available | Negative | 1386555 - 1387796 | 44856.4 |
| cyclically-permuted mutarotase family protein | SAMN04488524_1180 | Not Available | Negative | 1387818 - 1388954 | 40246.5 |
| n-acetylneuraminate lyase | SAMN04488524_1181 | Not Available | Negative | 1388996 - 1389934 | 34346.5 |
| starch-binding associating with outer membrane | SAMN04488524_1182 | Not Available | Negative | 1390010 - 1391593 | 58898.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

