Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent peptidase imma, m78 family | SAMN04488524_1153 | Not Available | Positive | 1355233 - 1356303 | 41322.9 |
| hypothetical protein | SAMN04488524_1154 | Not Available | Negative | 1356347 - 1357033 | 26043.2 |
| hypothetical protein | SAMN04488524_1155 | Not Available | Negative | 1357030 - 1357935 | 35135.2 |
| hypothetical protein | SAMN04488524_1156 | Not Available | Negative | 1358187 - 1358951 | 29240.0 |
| res domain-containing protein | SAMN04488524_1157 | Not Available | Negative | 1358948 - 1360117 | 45354.8 |
| hypothetical protein | SAMN04488524_1158 | Not Available | Negative | 1360431 - 1360649 | 8553.39 |
| arac-type dna-binding protein | SAMN04488524_1159 | Not Available | Negative | 1360646 - 1361014 | 14472.6 |
| hypothetical protein | SAMN04488524_1160 | Not Available | Negative | 1361032 - 1361259 | 8753.4 |
| hypothetical protein | SAMN04488524_1161 | Not Available | Negative | 1361266 - 1361493 | 8746.66 |
| hypothetical protein | SAMN04488524_1162 | Not Available | Negative | 1361664 - 1362035 | 13627.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

